STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66635.1Patatin. (273 aa)    
Predicted Functional Partners:
GAT64602.1
Phosphoesterase.
  
  0.696
GAT67109.1
AMP-dependent synthetase.
    
 0.669
GAT68970.1
Type VI secretion protein.
    
   0.652
GAT66789.1
Beta-lactamase.
     
 0.547
GAT66634.1
ABC transporter permease.
       0.538
GAT67123.1
Beta-ketoacyl synthase.
    
 0.522
GAT65978.1
Alpha/beta hydrolase fold-like protein.
    
 0.516
GAT68449.1
Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
  0.439
GAT66631.1
alpha-N-arabinofuranosidase.
       0.438
GAT66632.1
ABC transporter substrate-binding protein.
       0.438
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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