STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66658.1ROK family transcriptional regulator. (397 aa)    
Predicted Functional Partners:
GAT68192.1
Polyphosphate glucokinase.
  
  
 0.680
GAT65196.1
PTS sugar transporter.
  
 0.677
GAT65193.1
PTS sugar transporter subunit IIA.
  
 0.676
GAT64934.1
Glucokinase.
  
  
 
0.592
GAT66657.1
Sugar ABC transporter substrate-binding protein.
 
     0.521
GAT69324.1
Mannose-1-phosphate guanyltransferase.
  
 
 0.515
GAT65640.1
Chitinase.
  
  
  0.501
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.486
GAT70618.1
Phosphoglucomutase.
     
 0.480
GAT65197.1
PTS glucose transporter subunit IIA.
  
 
 0.478
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.