STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66716.1gntR family transcriptional regulator. (241 aa)    
Predicted Functional Partners:
GAT69872.1
gntR family transcriptional regulator.
  
    0.679
GAT67831.1
gntR family transcriptional regulator.
  
    0.662
GAT65762.1
gntR family transcriptional regulator.
  
  
 0.638
GAT69954.1
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
    
  0.605
GAT67719.1
gntR family transcriptional regulator.
  
    0.578
GAT66013.1
acetyl-CoA carboxyltransferase.
  
  
 0.576
GAT70374.1
gntR family transcriptional regulator.
  
    0.571
GAT68301.1
Transcriptional regulator.
  
    0.570
GAT66943.1
gntR family transcriptional regulator.
  
    0.525
GAT66717.1
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate).
  
    0.511
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.