STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66757.1Oxidoreductase. (301 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.652
GAT66098.1
Xylose isomerase.
  
 
 0.610
GAT67670.1
AP endonuclease.
  
 
 0.598
GAT70352.1
Xylose isomerase.
  
 
 0.582
GAT70363.1
AP endonuclease.
  
 
 0.582
GAT69954.1
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
    
  0.546
GAT66493.1
TDP-4-oxo-6-deoxy-D-glucose aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.540
GAT67120.1
Glutamine--scyllo-inositol aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.540
GAT68867.1
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.540
GAT70810.1
Cell wall biogenesis regulatory pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.540
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.