Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT66776.1 | GAT66779.1 | PS9374_02428 | PS9374_02431 | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Hypothetical protein. | 0.495 |
| GAT66776.1 | GAT66780.1 | PS9374_02428 | PS9374_02432 | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | DUF3097 domain-containing protein. | 0.581 |
| GAT66776.1 | GAT66781.1 | PS9374_02428 | PS9374_02433 | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Membrane protein. | 0.441 |
| GAT66776.1 | dnaJ | PS9374_02428 | PS9374_02429 | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.876 |
| GAT66776.1 | hrcA | PS9374_02428 | PS9374_02430 | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | hrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.944 |
| GAT66779.1 | GAT66776.1 | PS9374_02431 | PS9374_02428 | Hypothetical protein. | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.495 |
| GAT66779.1 | GAT66780.1 | PS9374_02431 | PS9374_02432 | Hypothetical protein. | DUF3097 domain-containing protein. | 0.588 |
| GAT66779.1 | GAT66781.1 | PS9374_02431 | PS9374_02433 | Hypothetical protein. | Membrane protein. | 0.528 |
| GAT66779.1 | GAT67169.1 | PS9374_02431 | PS9374_02822 | Hypothetical protein. | Hypothetical protein. | 0.652 |
| GAT66779.1 | dnaJ | PS9374_02431 | PS9374_02429 | Hypothetical protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.492 |
| GAT66779.1 | hrcA | PS9374_02431 | PS9374_02430 | Hypothetical protein. | hrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.501 |
| GAT66780.1 | GAT66776.1 | PS9374_02432 | PS9374_02428 | DUF3097 domain-containing protein. | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.581 |
| GAT66780.1 | GAT66779.1 | PS9374_02432 | PS9374_02431 | DUF3097 domain-containing protein. | Hypothetical protein. | 0.588 |
| GAT66780.1 | GAT66781.1 | PS9374_02432 | PS9374_02433 | DUF3097 domain-containing protein. | Membrane protein. | 0.736 |
| GAT66780.1 | dnaJ | PS9374_02432 | PS9374_02429 | DUF3097 domain-containing protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.470 |
| GAT66780.1 | hrcA | PS9374_02432 | PS9374_02430 | DUF3097 domain-containing protein. | hrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.632 |
| GAT66781.1 | GAT66776.1 | PS9374_02433 | PS9374_02428 | Membrane protein. | 16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.441 |
| GAT66781.1 | GAT66779.1 | PS9374_02433 | PS9374_02431 | Membrane protein. | Hypothetical protein. | 0.528 |
| GAT66781.1 | GAT66780.1 | PS9374_02433 | PS9374_02432 | Membrane protein. | DUF3097 domain-containing protein. | 0.736 |
| GAT66781.1 | hrcA | PS9374_02433 | PS9374_02430 | Membrane protein. | hrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.446 |
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