STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66791.1Fatty acid-binding protein DegV. (356 aa)    
Predicted Functional Partners:
GAT67508.1
Dihydroxyacetone kinase.
 
 0.995
GAT66790.1
DNA uptake protein-binding protein-like protein.
 
     0.737
GAT66789.1
Beta-lactamase.
       0.692
GAT66792.1
Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
       0.508
GAT66793.1
Hypothetical protein.
       0.492
GAT68402.1
Phosphoglycerate mutase.
      0.487
disA
Dna integrity scanning protein disa; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process.
  
    0.465
GAT67730.1
Anti-sigma factor.
  
     0.432
GAT70931.1
N-acetyltransferase; Belongs to the arylamine N-acetyltransferase family.
 
     0.424
GAT69296.1
Lysophospholipase.
     
 0.400
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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