STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66792.1Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (402 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.998
hutH
Histidine ammonia-lyase.
 
  
 0.950
GAT67117.1
Tyrosine ammonia-lyase.
 
  
 0.950
hutI
Imidazolonepropionase.
  
  
 
0.878
GAT65529.1
N-formimino-L-glutamate deiminase.
 
  
 0.830
GAT66793.1
Hypothetical protein.
       0.773
GAT66791.1
Fatty acid-binding protein DegV.
       0.508
GAT68255.1
Amidohydrolase.
 
  
 0.428
GAT64899.1
Hydroxydechloroatrazine ethylaminohydrolase.
 
  
 0.422
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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