STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66830.1Glutamate ABC transporter ATP-binding protein. (251 aa)    
Predicted Functional Partners:
GAT66832.1
Glutamate ABC transporter permease.
 
 0.999
GAT66833.1
Amino acid ABC transporter permease.
 0.999
GAT66831.1
Glutamate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.982
GAT64739.1
ABC transporter permease.
 0.979
GAT69172.1
ABC transporter permease.
 0.973
GAT64672.1
Glutamate-binding protein.
 
 0.958
GAT64740.1
ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.948
GAT70740.1
Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.897
GAT66765.1
Amino acid ABC transporter/signal transduction systems periplasmic component-like protein.
 
 0.896
GAT69306.1
Murein transglycosylase.
 
 0.880
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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