STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66856.1AMP-dependent synthetase. (518 aa)    
Predicted Functional Partners:
GAT67109.1
AMP-dependent synthetase.
 
0.990
GAT70672.1
Non-ribosomal peptide synthetase.
 
 0.985
GAT70666.1
Peptide synthetase.
0.977
GAT70686.1
Non-ribosomal peptide synthetase.
 
0.916
GAT68151.1
Non-ribosomal peptide synthase/polyketide synthase.
 
 
  0.915
GAT66857.1
Non-ribosomal peptide synthetase.
 
0.907
GAT70156.1
Polyketide synthase-like protein.
 
 0.896
GAT70671.1
Non-ribosomal peptide synthetase.
 
0.894
GAT70670.1
Non-ribosomal peptide synthetase.
0.892
GAT67431.1
Non-ribosomal peptide synthetase.
 
0.871
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.