Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT64811.1 | GAT66092.1 | PS9374_00443 | PS9374_01736 | Membrane protein. | enoyl-CoA hydratase. | 0.540 |
GAT64811.1 | GAT66140.1 | PS9374_00443 | PS9374_01784 | Membrane protein. | dUTPase. | 0.764 |
GAT64811.1 | GAT66879.1 | PS9374_00443 | PS9374_02531 | Membrane protein. | DNA-binding protein. | 0.686 |
GAT64811.1 | GAT68268.1 | PS9374_00443 | PS9374_03930 | Membrane protein. | DUF3145 domain-containing protein. | 0.625 |
GAT64811.1 | GAT69328.1 | PS9374_00443 | PS9374_05003 | Membrane protein. | Transcriptional regulator. | 0.674 |
GAT64811.1 | GAT70531.1 | PS9374_00443 | PS9374_06217 | Membrane protein. | Mycothiol maleylpyruvate isomerase. | 0.646 |
GAT64811.1 | GAT70954.1 | PS9374_00443 | PS9374_06643 | Membrane protein. | Aminopeptidase N. | 0.580 |
GAT64811.1 | nucS | PS9374_00443 | PS9374_01074 | Membrane protein. | Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.607 |
GAT64811.1 | rbpA | PS9374_00443 | PS9374_02944 | Membrane protein. | Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.749 |
GAT66092.1 | GAT64811.1 | PS9374_01736 | PS9374_00443 | enoyl-CoA hydratase. | Membrane protein. | 0.540 |
GAT66092.1 | GAT66140.1 | PS9374_01736 | PS9374_01784 | enoyl-CoA hydratase. | dUTPase. | 0.764 |
GAT66092.1 | GAT66879.1 | PS9374_01736 | PS9374_02531 | enoyl-CoA hydratase. | DNA-binding protein. | 0.628 |
GAT66092.1 | GAT68268.1 | PS9374_01736 | PS9374_03930 | enoyl-CoA hydratase. | DUF3145 domain-containing protein. | 0.764 |
GAT66092.1 | GAT69328.1 | PS9374_01736 | PS9374_05003 | enoyl-CoA hydratase. | Transcriptional regulator. | 0.753 |
GAT66092.1 | GAT70531.1 | PS9374_01736 | PS9374_06217 | enoyl-CoA hydratase. | Mycothiol maleylpyruvate isomerase. | 0.524 |
GAT66092.1 | rbpA | PS9374_01736 | PS9374_02944 | enoyl-CoA hydratase. | Membrane protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.635 |
GAT66140.1 | GAT64811.1 | PS9374_01784 | PS9374_00443 | dUTPase. | Membrane protein. | 0.764 |
GAT66140.1 | GAT66092.1 | PS9374_01784 | PS9374_01736 | dUTPase. | enoyl-CoA hydratase. | 0.764 |
GAT66140.1 | GAT66879.1 | PS9374_01784 | PS9374_02531 | dUTPase. | DNA-binding protein. | 0.725 |
GAT66140.1 | GAT68268.1 | PS9374_01784 | PS9374_03930 | dUTPase. | DUF3145 domain-containing protein. | 0.726 |
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