STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT66941.1Copper homeostasis protein CutC; Belongs to the CutC family. (224 aa)    
Predicted Functional Partners:
GAT70517.1
beta-N-acetylhexosaminidase.
 
     0.661
GAT66942.1
N-acetyltransferase GCN5.
       0.636
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
    0.599
GAT66892.1
beta-N-acetylhexosaminidase.
 
     0.587
GAT64917.1
3-carboxymuconate cyclase.
  
    0.536
GAT65193.1
PTS sugar transporter subunit IIA.
 
   
 0.486
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
   0.458
GAT68132.1
Membrane dipeptidase.
 
   
 0.458
GAT66469.1
N-acetylglucosamine-6-phosphate deacetylase.
 
     0.454
GAT65197.1
PTS glucose transporter subunit IIA.
 
   
 0.431
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.