STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67011.1Esterase. (441 aa)    
Predicted Functional Partners:
GAT71282.1
Endo-1,4-beta-xylanase.
 
 
 0.943
GAT66289.1
Beta-1 4-xylanase-like protein.
 
 0.922
GAT69986.1
Pectate lyase.
 
  0.817
GAT65639.1
Chitinase.
 
  
  0.814
GAT66627.1
Xyloglucanase.
  
     0.759
GAT67867.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  0.759
GAT69917.1
Pectate lyase.
 
  0.750
GAT68142.1
Endo-1,4-beta-xylanase.
 
 
 0.736
GAT70717.1
Oxidoreductase.
 
 
 0.709
GAT68190.1
Cellobiohydrolase A-like protein; Belongs to the glycosyl hydrolase family 6.
  
     0.703
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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