STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67019.1Copper-sensing transcriptional repressor CsoR. (87 aa)    
Predicted Functional Partners:
GAT67023.1
Permease.
 
   
 0.892
GAT67022.1
Sulfurtransferase.
 
   
 0.826
GAT67021.1
MBL fold metallo-hydrolase.
 
   
 0.714
GAT67950.1
MBL fold metallo-hydrolase.
 
   
 0.636
GAT71160.1
Flagellar motor switch protein FliN.
    
   0.566
GAT67020.1
Thiosulfate sulfurtransferase.
 
     0.532
GAT65108.1
Alcohol dehydrogenase.
  
  
 0.513
GAT66059.1
Alcohol dehydrogenase.
  
  
 0.513
GAT67665.1
Molecular chaperone GroES.
  
  
 0.513
GAT69809.1
Hydrolase.
 
   
 0.511
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.