STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67024.1Phage integrase; Belongs to the 'phage' integrase family. (338 aa)    
Predicted Functional Partners:
GAT68807.1
Integrase; Belongs to the 'phage' integrase family.
  
     0.774
GAT67239.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.760
GAT68933.1
Integrase.
  
     0.750
GAT66884.1
Cell division protein FtsK.
  
   
 0.727
GAT69360.1
Integrase.
  
     0.709
GAT69134.1
Chromosome partitioning protein ParB; Belongs to the ParB family.
  
    0.537
GAT69133.1
Chromosome partitioning protein.
 
     0.534
GAT67478.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.512
GAT64719.1
Chromosome partitioning ATPase.
 
     0.499
GAT67023.1
Permease.
       0.481
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.