STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67149.1Alkylhydroperoxidase. (356 aa)    
Predicted Functional Partners:
GAT67150.1
Glucose-methanol-choline oxidoreductase.
 
     0.962
GAT67151.1
Regulator.
       0.843
GAT67162.1
Enediyne biosynthesis protein UnbU.
 
     0.809
GAT67163.1
RNA-binding protein.
 
     0.809
GAT67148.1
Wyosine base formation.
 
     0.801
GAT67160.1
4-hydroxybenzoyl-CoA thioesterase.
 
     0.782
GAT67161.1
Erythronolide synthase.
  
     0.774
GAT67136.1
acyl-CoA dehydrogenase.
  
     0.761
GAT67135.1
methionyl-tRNA formyltransferase.
  
     0.750
GAT67158.1
Cytochrome P450.
  
     0.683
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.