STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67226.1Endo-1,3-beta-glucanase. (463 aa)    
Predicted Functional Partners:
GAT66948.1
Glycoside hydrolase family protein.
  
     0.736
GAT67850.1
Secreted protein.
  
 0.711
GAT66292.1
Cellulose 1,4-beta-cellobiosidase.
  
  
  0.683
GAT66293.1
Endoglucanase.
 
  
 0.662
GAT70449.1
alpha-L-arabinofuranosidase.
 
     0.655
GAT69991.1
Chitinase.
 
    0.643
GAT65308.1
Beta-glucanase.
 
      0.642
GAT67638.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
    0.637
GAT67867.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.611
GAT70453.1
Endo-1,4-beta-xylanase.
   
 0.609
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.