STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67396.1Type 12 methyltransferase. (239 aa)    
Predicted Functional Partners:
GAT67123.1
Beta-ketoacyl synthase.
   
 0.824
GAT67109.1
AMP-dependent synthetase.
    
 0.820
GAT67395.1
Pyridine nucleotide-disulfide oxidoreductase.
       0.773
GAT70156.1
Polyketide synthase-like protein.
   
 0.727
GAT66225.1
FAD-dependent oxidoreductase; Belongs to the GcvT family.
     
 0.690
GAT68384.1
Platelet-activating factor acetylhydrolase plasma/intracellular isoform II.
  
     0.684
GAT67388.1
Non-ribosomal peptide synthetase.
 
  
 0.621
GAT70893.1
DUF1814 domain-containing protein.
  
     0.617
GAT67386.1
Condensation protein.
 
  
  0.599
GAT67389.1
Beta-ketoacyl synthase.
 
 
 0.597
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.