STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67471.1Endo-1,3-beta-glucanase. (416 aa)    
Predicted Functional Partners:
GAT67850.1
Secreted protein.
  
 0.941
GAT65639.1
Chitinase.
     0.922
GAT67682.1
Serine protease.
 
     0.898
GAT66639.1
Streptogrisin C.
 
     0.739
GAT69963.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
 0.604
GAT65883.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
  
 0.600
GAT66892.1
beta-N-acetylhexosaminidase.
  
  0.583
GAT69499.1
Chitinase.
 
     0.582
GAT66293.1
Endoglucanase.
    
 0.551
GAT70024.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
 0.539
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.