| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT66529.1 | GAT67507.1 | PS9374_02179 | PS9374_03162 | ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase RecG. | 0.669 |
| GAT66529.1 | mutM | PS9374_02179 | PS9374_03155 | ATP-dependent DNA helicase PcrA. | 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.555 |
| GAT66529.1 | polA | PS9374_02179 | PS9374_00367 | ATP-dependent DNA helicase PcrA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.691 |
| GAT66529.1 | recA | PS9374_02179 | PS9374_02493 | ATP-dependent DNA helicase PcrA. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.927 |
| GAT66529.1 | recF | PS9374_02179 | PS9374_04790 | ATP-dependent DNA helicase PcrA. | DNA recombination protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.491 |
| GAT66529.1 | ruvB | PS9374_02179 | PS9374_01324 | ATP-dependent DNA helicase PcrA. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.523 |
| GAT66529.1 | topA | PS9374_02179 | PS9374_04922 | ATP-dependent DNA helicase PcrA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.768 |
| GAT67507.1 | GAT66529.1 | PS9374_03162 | PS9374_02179 | ATP-dependent DNA helicase RecG. | ATP-dependent DNA helicase PcrA. | 0.669 |
| GAT67507.1 | GAT67508.1 | PS9374_03162 | PS9374_03163 | ATP-dependent DNA helicase RecG. | Dihydroxyacetone kinase. | 0.884 |
| GAT67507.1 | murF | PS9374_03162 | PS9374_00453 | ATP-dependent DNA helicase RecG. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.587 |
| GAT67507.1 | mutM | PS9374_03162 | PS9374_03155 | ATP-dependent DNA helicase RecG. | 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.588 |
| GAT67507.1 | polA | PS9374_03162 | PS9374_00367 | ATP-dependent DNA helicase RecG. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.733 |
| GAT67507.1 | recA | PS9374_03162 | PS9374_02493 | ATP-dependent DNA helicase RecG. | Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.747 |
| GAT67507.1 | recF | PS9374_03162 | PS9374_04790 | ATP-dependent DNA helicase RecG. | DNA recombination protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.588 |
| GAT67507.1 | ruvA | PS9374_03162 | PS9374_01325 | ATP-dependent DNA helicase RecG. | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.662 |
| GAT67507.1 | ruvB | PS9374_03162 | PS9374_01324 | ATP-dependent DNA helicase RecG. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.590 |
| GAT67507.1 | topA | PS9374_03162 | PS9374_04922 | ATP-dependent DNA helicase RecG. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.705 |
| GAT67508.1 | GAT67507.1 | PS9374_03163 | PS9374_03162 | Dihydroxyacetone kinase. | ATP-dependent DNA helicase RecG. | 0.884 |
| murF | GAT67507.1 | PS9374_00453 | PS9374_03162 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | ATP-dependent DNA helicase RecG. | 0.587 |
| mutM | GAT66529.1 | PS9374_03155 | PS9374_02179 | 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | ATP-dependent DNA helicase PcrA. | 0.555 |