STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67616.1Serine/threonine protein kinase. (703 aa)    
Predicted Functional Partners:
GAT69051.1
Phosphoprotein phosphatase.
 
 0.840
GAT65338.1
Phosphoprotein phosphatase.
 
 0.839
GAT65341.1
Protein phosphatase.
 
  0.829
GAT67617.1
Serine/threonine protein kinase.
 
    
0.827
GAT69096.1
Signal transduction histidine kinase.
   
 0.776
GAT71392.1
Signal transduction histidine kinase.
   
 0.776
GAT69144.1
Serine/threonine protein kinase.
  
     0.773
GAT64471.1
Multi-sensor hybrid histidine kinase.
   
 0.769
GAT64519.1
Multi-sensor hybrid histidine kinase.
   
 0.769
GAT64628.1
Multi-sensor signal transduction histidine kinase.
   
 0.769
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.