STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67618.1Amino acid oxidase. (526 aa)    
Predicted Functional Partners:
GAT68017.1
Acetoin utilization protein AcuC.
    
 0.979
GAT70225.1
Helicase SNF2.
  
 
 0.905
GAT68608.1
Stilbene synthase.
    
 
 0.896
GAT65999.1
Helicase SNF2.
    
 0.891
GAT71034.1
Alcohol dehydrogenase.
    
  0.855
GAT67635.1
Copper amine oxidase.
   
 
 0.783
GAT67229.1
Iron-sulfur-binding protein.
  
 
 0.742
GAT65836.1
Phytoene synthase.
   
 
 0.736
GAT66202.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.736
GAT69859.1
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.713
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.