GAT67688.1 protein (Planomonospora sphaerica)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

GAT67688.1

ABC transporter ATP-binding protein. (286 aa)

Predicted Functional Partners:

GAT67687.1

0.982

GAT67689.1

0.970

GAT69835.1

0.940

GAT65570.1

0.926

GAT65575.1

0.926

GAT65579.1

0.926

GAT65571.1

0.923

GAT65574.1

0.923

GAT65580.1

0.923

GAT69869.1

0.922

Your Current Organism:

Planomonospora sphaerica

NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAT65570.1	GAT65571.1	PS9374_01203	PS9374_01204	Nitrate ABC transporter permease.	ABC transporter permease.	0.853
GAT65570.1	GAT67688.1	PS9374_01203	PS9374_03346	Nitrate ABC transporter permease.	ABC transporter ATP-binding protein.	0.926
GAT65570.1	GAT67689.1	PS9374_01203	PS9374_03347	Nitrate ABC transporter permease.	ABC transporter substrate-binding protein.	0.711
GAT65570.1	GAT69835.1	PS9374_01203	PS9374_05515	Nitrate ABC transporter permease.	ABC transporter permease.	0.768
GAT65570.1	GAT69869.1	PS9374_01203	PS9374_05549	Nitrate ABC transporter permease.	ABC transporter permease.	0.403
GAT65571.1	GAT65570.1	PS9374_01204	PS9374_01203	ABC transporter permease.	Nitrate ABC transporter permease.	0.853
GAT65571.1	GAT67688.1	PS9374_01204	PS9374_03346	ABC transporter permease.	ABC transporter ATP-binding protein.	0.923
GAT65571.1	GAT67689.1	PS9374_01204	PS9374_03347	ABC transporter permease.	ABC transporter substrate-binding protein.	0.690
GAT65571.1	GAT69835.1	PS9374_01204	PS9374_05515	ABC transporter permease.	ABC transporter permease.	0.854
GAT65574.1	GAT65575.1	PS9374_01207	PS9374_01208	ABC transporter permease.	Nitrate ABC transporter permease.	0.856
GAT65574.1	GAT67688.1	PS9374_01207	PS9374_03346	ABC transporter permease.	ABC transporter ATP-binding protein.	0.923
GAT65574.1	GAT67689.1	PS9374_01207	PS9374_03347	ABC transporter permease.	ABC transporter substrate-binding protein.	0.701
GAT65574.1	GAT69835.1	PS9374_01207	PS9374_05515	ABC transporter permease.	ABC transporter permease.	0.850
GAT65575.1	GAT65574.1	PS9374_01208	PS9374_01207	Nitrate ABC transporter permease.	ABC transporter permease.	0.856
GAT65575.1	GAT67688.1	PS9374_01208	PS9374_03346	Nitrate ABC transporter permease.	ABC transporter ATP-binding protein.	0.926
GAT65575.1	GAT67689.1	PS9374_01208	PS9374_03347	Nitrate ABC transporter permease.	ABC transporter substrate-binding protein.	0.722
GAT65575.1	GAT69835.1	PS9374_01208	PS9374_05515	Nitrate ABC transporter permease.	ABC transporter permease.	0.763
GAT65575.1	GAT69869.1	PS9374_01208	PS9374_05549	Nitrate ABC transporter permease.	ABC transporter permease.	0.410
GAT65579.1	GAT65580.1	PS9374_01212	PS9374_01213	Nitrate ABC transporter permease.	ABC transporter permease.	0.851
GAT65579.1	GAT67688.1	PS9374_01212	PS9374_03346	Nitrate ABC transporter permease.	ABC transporter ATP-binding protein.	0.926