STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT67866.1lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (290 aa)    
Predicted Functional Partners:
GAT65724.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.773
GAT64414.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.772
GAT71197.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.765
GAT68037.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.763
GAT69216.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.757
GAT70119.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.747
GAT66638.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.731
GAT65285.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.727
GAT65036.1
lysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.710
GAT67329.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.626
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.