Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT64988.1 | GAT68027.1 | PS9374_00620 | PS9374_03688 | Transporter. | Glutaredoxin. | 0.583 |
GAT64988.1 | GAT68041.1 | PS9374_00620 | PS9374_03702 | Transporter. | Cytochrome C biogenesis protein ResB. | 0.492 |
GAT65775.1 | GAT68027.1 | PS9374_01415 | PS9374_03688 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Glutaredoxin. | 0.944 |
GAT65775.1 | GAT68653.1 | PS9374_01415 | PS9374_04318 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.504 |
GAT65775.1 | ribBA | PS9374_01415 | PS9374_00478 | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.803 |
GAT65940.1 | GAT68027.1 | PS9374_01584 | PS9374_03688 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Glutaredoxin. | 0.587 |
GAT65940.1 | msrA | PS9374_01584 | PS9374_03730 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.499 |
GAT68027.1 | GAT64988.1 | PS9374_03688 | PS9374_00620 | Glutaredoxin. | Transporter. | 0.583 |
GAT68027.1 | GAT65775.1 | PS9374_03688 | PS9374_01415 | Glutaredoxin. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.944 |
GAT68027.1 | GAT65940.1 | PS9374_03688 | PS9374_01584 | Glutaredoxin. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.587 |
GAT68027.1 | GAT68031.1 | PS9374_03688 | PS9374_03692 | Glutaredoxin. | uroporphyrin-III C-methyltransferase. | 0.604 |
GAT68027.1 | GAT68041.1 | PS9374_03688 | PS9374_03702 | Glutaredoxin. | Cytochrome C biogenesis protein ResB. | 0.596 |
GAT68027.1 | GAT68321.1 | PS9374_03688 | PS9374_03983 | Glutaredoxin. | Ribonucleoside-diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.944 |
GAT68027.1 | GAT68653.1 | PS9374_03688 | PS9374_04318 | Glutaredoxin. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.732 |
GAT68027.1 | msrA | PS9374_03688 | PS9374_03730 | Glutaredoxin. | Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.882 |
GAT68027.1 | rex | PS9374_03688 | PS9374_03689 | Glutaredoxin. | REX family transcriptional regulator; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | 0.685 |
GAT68027.1 | ribBA | PS9374_03688 | PS9374_00478 | Glutaredoxin. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.723 |
GAT68031.1 | GAT68027.1 | PS9374_03692 | PS9374_03688 | uroporphyrin-III C-methyltransferase. | Glutaredoxin. | 0.604 |
GAT68031.1 | GAT68041.1 | PS9374_03692 | PS9374_03702 | uroporphyrin-III C-methyltransferase. | Cytochrome C biogenesis protein ResB. | 0.864 |
GAT68031.1 | GAT68653.1 | PS9374_03692 | PS9374_04318 | uroporphyrin-III C-methyltransferase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.613 |
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