STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68273.1Thiosulfate sulfurtransferase. (270 aa)    
Predicted Functional Partners:
GAT70837.1
2-dehydropantoate 2-reductase.
 
   
  0.918
GAT69589.1
Cystathionine gamma-synthase.
  
 
 0.906
GAT66265.1
Thiosulfate sulfurtransferase.
  
  
0.898
GAT64961.1
Aminotransferase V.
   
 0.876
GAT66069.1
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.873
GAT66071.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.871
GAT67685.1
FMN reductase.
    
  0.861
GAT66377.1
Aspartate aminotransferase.
     
 0.859
GAT69215.1
Aminotransferase.
     
 0.859
GAT68274.1
Phosphodiesterase.
       0.839
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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