STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpAlamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (251 aa)    
Predicted Functional Partners:
GAT68298.1
Allophanate hydrolase subunit 2.
 
 0.999
GAT68299.1
Allophanate hydrolase.
 
 0.999
GAT64660.1
1-pyrroline-5-carboxylate dehydrogenase.
   
 
  0.899
GAT64990.1
Glutamine synthetase.
   
 
  0.859
GAT65014.1
Glutamine synthetase.
   
 
  0.859
GAT65232.1
NAD-glutamate dehydrogenase.
    
  0.859
GAT64659.1
Proline dehydrogenase.
   
 
  0.783
GAT65513.1
Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
   
 
  0.776
GAT66963.1
Glutamine synthetase.
   
 
  0.776
GAT68918.1
Glutamine synthetase.
   
 
  0.776
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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