STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68362.1Peptide ABC transporter substrate-binding protein. (580 aa)    
Predicted Functional Partners:
GAT68363.1
ABC transporter permease.
 
 0.946
GAT68364.1
ABC transporter permease.
 
 0.938
GAT64625.1
Peptide ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.824
GAT68365.1
Peptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.751
GAT68366.1
Peptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.709
GAT66997.1
Peptide ABC transporter permease.
 
 0.697
GAT68305.1
Peptide ABC transporter permease.
 
 0.691
GAT70018.1
Nickel ABC transporter substrate-binding protein.
  
  
  0.679
GAT68661.1
Peptide ABC transporter substrate-binding protein.
  
  
  0.675
GAT64686.1
4-phytase.
  
  
  0.665
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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