STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68450.1Zn-dependent hydrolase. (213 aa)    
Predicted Functional Partners:
GAT68451.1
Mycothiol-dependent maleylpyruvate isomerase.
       0.843
GAT65683.1
Hydrolase.
  
  
 
0.758
GAT67960.1
MBL fold metallo-hydrolase.
  
     0.655
GAT64890.1
Oxidoreductase.
   
  0.618
GAT69751.1
Molybdopterin biosynthesis protein MoeZ.
  
  0.571
GAT67109.1
AMP-dependent synthetase.
   
 0.539
GAT67123.1
Beta-ketoacyl synthase.
   
 0.529
whiA
Sporulation protein; Involved in cell division and chromosome segregation.
     
 0.525
GAT69809.1
Hydrolase.
  
  0.486
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.476
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.