STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68485.1DUF4440 domain-containing protein. (126 aa)    
Predicted Functional Partners:
GAT68484.1
Hypothetical protein.
       0.780
GAT71317.1
Erythromycin esterase.
  
     0.597
GAT68486.1
padR family transcriptional regulator.
 
     0.584
GAT67265.1
Acyltransferase.
  
     0.578
GAT68483.1
ADP-ribosylglycohydrolase.
       0.561
GAT70461.1
Hydrolase.
  
     0.543
GAT66184.1
phzA/B-like protein.
 
  
  0.491
GAT68401.1
Antibiotic biosynthesis monooxygenase.
  
     0.456
GAT68487.1
Membrane protein.
 
     0.413
GAT66672.1
Nitrilase/cyanide hydratase.
  
     0.404
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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