Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT66184.1 | GAT68485.1 | PS9374_01828 | PS9374_04150 | phzA/B-like protein. | DUF4440 domain-containing protein. | 0.491 |
GAT66672.1 | GAT68485.1 | PS9374_02322 | PS9374_04150 | Nitrilase/cyanide hydratase. | DUF4440 domain-containing protein. | 0.404 |
GAT67265.1 | GAT68401.1 | PS9374_02918 | PS9374_04065 | Acyltransferase. | Antibiotic biosynthesis monooxygenase. | 0.705 |
GAT67265.1 | GAT68485.1 | PS9374_02918 | PS9374_04150 | Acyltransferase. | DUF4440 domain-containing protein. | 0.578 |
GAT68401.1 | GAT67265.1 | PS9374_04065 | PS9374_02918 | Antibiotic biosynthesis monooxygenase. | Acyltransferase. | 0.705 |
GAT68401.1 | GAT68485.1 | PS9374_04065 | PS9374_04150 | Antibiotic biosynthesis monooxygenase. | DUF4440 domain-containing protein. | 0.456 |
GAT68483.1 | GAT68484.1 | PS9374_04148 | PS9374_04149 | ADP-ribosylglycohydrolase. | Hypothetical protein. | 0.561 |
GAT68483.1 | GAT68485.1 | PS9374_04148 | PS9374_04150 | ADP-ribosylglycohydrolase. | DUF4440 domain-containing protein. | 0.561 |
GAT68484.1 | GAT68483.1 | PS9374_04149 | PS9374_04148 | Hypothetical protein. | ADP-ribosylglycohydrolase. | 0.561 |
GAT68484.1 | GAT68485.1 | PS9374_04149 | PS9374_04150 | Hypothetical protein. | DUF4440 domain-containing protein. | 0.780 |
GAT68484.1 | GAT68486.1 | PS9374_04149 | PS9374_04151 | Hypothetical protein. | padR family transcriptional regulator. | 0.521 |
GAT68485.1 | GAT66184.1 | PS9374_04150 | PS9374_01828 | DUF4440 domain-containing protein. | phzA/B-like protein. | 0.491 |
GAT68485.1 | GAT66672.1 | PS9374_04150 | PS9374_02322 | DUF4440 domain-containing protein. | Nitrilase/cyanide hydratase. | 0.404 |
GAT68485.1 | GAT67265.1 | PS9374_04150 | PS9374_02918 | DUF4440 domain-containing protein. | Acyltransferase. | 0.578 |
GAT68485.1 | GAT68401.1 | PS9374_04150 | PS9374_04065 | DUF4440 domain-containing protein. | Antibiotic biosynthesis monooxygenase. | 0.456 |
GAT68485.1 | GAT68483.1 | PS9374_04150 | PS9374_04148 | DUF4440 domain-containing protein. | ADP-ribosylglycohydrolase. | 0.561 |
GAT68485.1 | GAT68484.1 | PS9374_04150 | PS9374_04149 | DUF4440 domain-containing protein. | Hypothetical protein. | 0.780 |
GAT68485.1 | GAT68486.1 | PS9374_04150 | PS9374_04151 | DUF4440 domain-containing protein. | padR family transcriptional regulator. | 0.584 |
GAT68485.1 | GAT68487.1 | PS9374_04150 | PS9374_04152 | DUF4440 domain-containing protein. | Membrane protein. | 0.413 |
GAT68485.1 | GAT70461.1 | PS9374_04150 | PS9374_06143 | DUF4440 domain-containing protein. | Hydrolase. | 0.543 |
page 1 of 2