STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68538.1Ketosteroid isomerase. (135 aa)    
Predicted Functional Partners:
GAT69948.1
Fumarate reductase.
  
  
  0.921
GAT69955.1
3-ketosteroid-delta-1-dehydrogenase.
  
  
  0.902
GAT70001.1
Ketosteroid isomerase.
  
  
 
0.781
GAT69943.1
3-ketosteroid-9-alpha-hydroxylase.
 
     0.775
GAT65270.1
propanoyl-CoA C-acyltransferase.
  
     0.765
GAT70002.1
F420-dependent oxidoreductase.
  
     0.763
GAT69927.1
maoC family dehydratase.
  
     0.762
GAT65269.1
DNA-binding protein.
  
     0.756
GAT69949.1
Iron-dependent extradiol dioxygenase.
  
    0.754
GAT69903.1
coA-transferase.
  
     0.751
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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