STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68647.1Nitrite reductase. (121 aa)    
Predicted Functional Partners:
GAT68646.1
Nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 0.999
GAT68645.1
Electron transfer flavoprotein.
 0.998
GAT68643.1
Nitrate transporter.
 
 0.985
GAT68644.1
Nitrite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.964
narY
Nitrate reductase subunit beta.
  
 
 0.951
GAT68649.1
Cobalamin biosynthesis protein CbiX.
    0.943
GAT71075.1
Nitrate reductase A subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.936
GAT68648.1
Uroporphyrinogen III synthetase.
 
  
 0.932
GAT71072.1
Nitrate reductase subunit gamma.
  
 
 0.932
GAT64990.1
Glutamine synthetase.
     
 0.912
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.