Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT65278.1 | GAT68785.1 | PS9374_00910 | PS9374_04450 | DNA helicase. | DNA primase. | 0.591 |
GAT67434.1 | GAT67835.1 | PS9374_03088 | PS9374_03495 | DNA-binding protein. | Transposase. | 0.613 |
GAT67434.1 | GAT68785.1 | PS9374_03088 | PS9374_04450 | DNA-binding protein. | DNA primase. | 0.694 |
GAT67835.1 | GAT67434.1 | PS9374_03495 | PS9374_03088 | Transposase. | DNA-binding protein. | 0.613 |
GAT67835.1 | GAT68785.1 | PS9374_03495 | PS9374_04450 | Transposase. | DNA primase. | 0.410 |
GAT68653.1 | GAT68785.1 | PS9374_04318 | PS9374_04450 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | DNA primase. | 0.706 |
GAT68653.1 | folD | PS9374_04318 | PS9374_02191 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.837 |
GAT68784.1 | GAT68785.1 | PS9374_04449 | PS9374_04450 | Hypothetical protein. | DNA primase. | 0.474 |
GAT68785.1 | GAT65278.1 | PS9374_04450 | PS9374_00910 | DNA primase. | DNA helicase. | 0.591 |
GAT68785.1 | GAT67434.1 | PS9374_04450 | PS9374_03088 | DNA primase. | DNA-binding protein. | 0.694 |
GAT68785.1 | GAT67835.1 | PS9374_04450 | PS9374_03495 | DNA primase. | Transposase. | 0.410 |
GAT68785.1 | GAT68653.1 | PS9374_04450 | PS9374_04318 | DNA primase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.706 |
GAT68785.1 | GAT68784.1 | PS9374_04450 | PS9374_04449 | DNA primase. | Hypothetical protein. | 0.474 |
GAT68785.1 | GAT68970.1 | PS9374_04450 | PS9374_04635 | DNA primase. | Type VI secretion protein. | 0.883 |
GAT68785.1 | dut | PS9374_04450 | PS9374_01777 | DNA primase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.400 |
GAT68785.1 | folD | PS9374_04450 | PS9374_02191 | DNA primase. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.403 |
GAT68970.1 | GAT68785.1 | PS9374_04635 | PS9374_04450 | Type VI secretion protein. | DNA primase. | 0.883 |
dut | GAT68785.1 | PS9374_01777 | PS9374_04450 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | DNA primase. | 0.400 |
folD | GAT68653.1 | PS9374_02191 | PS9374_04318 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.837 |
folD | GAT68785.1 | PS9374_02191 | PS9374_04450 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | DNA primase. | 0.403 |