STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68913.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
GAT65231.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.917
GAT68107.1
UDP-phosphate galactose phosphotransferase.
  
 
 0.917
GAT69565.1
LPS biosynthesis protein.
  
 0.778
GAT68112.1
LPS biosynthesis protein.
  
 0.592
GAT67971.1
Chromosome partitioning protein.
  
 0.556
GAT69724.1
Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.556
GAT71460.1
Beta-ketoacyl synthase.
  
 
 0.528
GAT68911.1
NB-ARC domain-containing protein.
   
   0.521
GAT70063.1
Teichoic acid ABC transporter ATP-binding protein.
  
  
 0.520
GAT68912.1
Hypothetical protein.
       0.476
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.