STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT68996.1gntR family transcriptional regulator. (271 aa)    
Predicted Functional Partners:
GAT65194.1
gntR family transcriptional regulator.
  
     0.773
GAT69872.1
gntR family transcriptional regulator.
  
     0.767
GAT67831.1
gntR family transcriptional regulator.
  
     0.751
GAT68241.1
gntR family transcriptional regulator.
  
     0.734
GAT66898.1
gntR family transcriptional regulator.
  
     0.712
GAT68301.1
Transcriptional regulator.
   
    0.655
GAT66899.1
gntR family transcriptional regulator.
  
     0.601
GAT68995.1
Hypothetical protein.
       0.495
GAT66716.1
gntR family transcriptional regulator.
  
    0.477
GAT66469.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.431
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.