Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT64372.1 | GAT66919.1 | PS9374_00002 | PS9374_02571 | Hydrolase. | Riboflavin kinase; Belongs to the ribF family. | 0.607 |
GAT64372.1 | GAT68851.1 | PS9374_00002 | PS9374_04516 | Hydrolase. | Riboflavin biosynthesis protein RibD. | 0.870 |
GAT64372.1 | GAT69023.1 | PS9374_00002 | PS9374_04689 | Hydrolase. | Haloacid dehalogenase. | 0.668 |
GAT64372.1 | GAT69324.1 | PS9374_00002 | PS9374_04999 | Hydrolase. | Mannose-1-phosphate guanyltransferase. | 0.923 |
GAT64372.1 | ribBA | PS9374_00002 | PS9374_00478 | Hydrolase. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.873 |
GAT64372.1 | ribH | PS9374_00002 | PS9374_00477 | Hydrolase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.447 |
GAT64674.1 | GAT69023.1 | PS9374_00305 | PS9374_04689 | Glycerol acyltransferase. | Haloacid dehalogenase. | 0.548 |
GAT66919.1 | GAT64372.1 | PS9374_02571 | PS9374_00002 | Riboflavin kinase; Belongs to the ribF family. | Hydrolase. | 0.607 |
GAT66919.1 | GAT68851.1 | PS9374_02571 | PS9374_04516 | Riboflavin kinase; Belongs to the ribF family. | Riboflavin biosynthesis protein RibD. | 0.750 |
GAT66919.1 | GAT69023.1 | PS9374_02571 | PS9374_04689 | Riboflavin kinase; Belongs to the ribF family. | Haloacid dehalogenase. | 0.585 |
GAT66919.1 | GAT69886.1 | PS9374_02571 | PS9374_05566 | Riboflavin kinase; Belongs to the ribF family. | FMN reductase. | 0.865 |
GAT66919.1 | ribBA | PS9374_02571 | PS9374_00478 | Riboflavin kinase; Belongs to the ribF family. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.942 |
GAT66919.1 | ribH | PS9374_02571 | PS9374_00477 | Riboflavin kinase; Belongs to the ribF family. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.959 |
GAT68851.1 | GAT64372.1 | PS9374_04516 | PS9374_00002 | Riboflavin biosynthesis protein RibD. | Hydrolase. | 0.870 |
GAT68851.1 | GAT66919.1 | PS9374_04516 | PS9374_02571 | Riboflavin biosynthesis protein RibD. | Riboflavin kinase; Belongs to the ribF family. | 0.750 |
GAT68851.1 | GAT69023.1 | PS9374_04516 | PS9374_04689 | Riboflavin biosynthesis protein RibD. | Haloacid dehalogenase. | 0.752 |
GAT68851.1 | GAT69324.1 | PS9374_04516 | PS9374_04999 | Riboflavin biosynthesis protein RibD. | Mannose-1-phosphate guanyltransferase. | 0.475 |
GAT68851.1 | ribBA | PS9374_04516 | PS9374_00478 | Riboflavin biosynthesis protein RibD. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
GAT68851.1 | ribH | PS9374_04516 | PS9374_00477 | Riboflavin biosynthesis protein RibD. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.992 |
GAT69023.1 | GAT64372.1 | PS9374_04689 | PS9374_00002 | Haloacid dehalogenase. | Hydrolase. | 0.668 |
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