STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT69075.1Two-component system sensor histidine kinase. (376 aa)    
Predicted Functional Partners:
GAT69074.1
Two-component system, regulatory protein.
  0.915
GAT70789.1
Signal transduction histidine kinase.
  
  
  0.773
GAT69488.1
Histidine kinase.
  
  
  0.755
GAT65040.1
Two-component system sensor histidine kinase.
  
     0.725
GAT65220.1
Histidine kinase.
  
  
  0.695
GAT68228.1
luxR family transcriptional regulator.
 
  0.691
GAT65498.1
luxR family transcriptional regulator.
 
  0.685
GAT67986.1
Transcriptional regulator.
  
  0.668
GAT67924.1
Histidine kinase.
  
  0.638
GAT70638.1
Histidine kinase.
  
  0.638
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.