STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT69144.1Serine/threonine protein kinase. (512 aa)    
Predicted Functional Partners:
murJ
Membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
      0.948
GAT65341.1
Protein phosphatase.
  
  0.815
GAT65338.1
Phosphoprotein phosphatase.
  
  0.814
GAT69051.1
Phosphoprotein phosphatase.
  
  0.813
GAT66979.1
Serine/threonine protein kinase.
  
   0.795
GAT66549.1
Serine/threonine protein kinase-like protein.
  
    0.776
GAT69096.1
Signal transduction histidine kinase.
   
 0.776
GAT71392.1
Signal transduction histidine kinase.
   
 0.776
GAT66209.1
Serine/threonine protein kinase.
  
     0.773
GAT67616.1
Serine/threonine protein kinase.
  
     0.773
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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