STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT69187.1Membrane protein. (176 aa)    
Predicted Functional Partners:
GAT69188.1
Hypothetical protein.
       0.843
GAT64948.1
Endonuclease.
 
     0.690
GAT66152.1
Membrane protein.
 
  
 0.625
GAT70275.1
Peptidase M15.
  
     0.608
GAT69665.1
ATPase.
  
     0.552
GAT66911.1
GCN5 family acetyltransferase.
  
     0.541
GAT69189.1
Hypothetical protein.
       0.527
GAT66227.1
Membrane protein.
  
  
 0.521
GAT68296.1
Hypothetical protein.
  
     0.514
GAT68589.1
Sulfotransferase.
 
     0.499
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.