STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT69332.1Membrane protein. (139 aa)    
Predicted Functional Partners:
GAT64968.1
F0F1 ATP synthase.
  
     0.767
GAT66601.1
Membrane protein.
  
     0.766
GAT64969.1
Phage-shock protein.
  
     0.729
GAT66114.1
Membrane protein.
  
     0.718
GAT67516.1
Lipoprotein.
  
     0.712
GAT71228.1
Putative serine-threonine protein kinase.
  
     0.684
GAT69647.1
DUF1707 domain-containing protein.
  
     0.646
GAT67973.1
Pilus assembly protein TadB.
  
     0.614
GAT64931.1
Membrane protein.
  
     0.599
GAT67549.1
Methyltransferase.
  
     0.599
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.