STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT69406.1Acetylhydrolase. (384 aa)    
Predicted Functional Partners:
GAT69407.1
Protease.
 
     0.796
GAT69408.1
Transporter.
 
     0.728
GAT69409.1
ABC transporter ATP-binding protein.
 
     0.622
GAT71090.1
Carbohydrate-binding protein; Belongs to the glycosyl hydrolase 18 family.
  
    0.617
GAT69410.1
gntR family transcriptional regulator.
 
     0.593
GAT70386.1
Arginine/hypothetical protein.
  
     0.536
GAT64971.1
Beta-1 3-glucan synthesis protein.
  
     0.461
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.