STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT70171.1Methyl-accepting chemotaxis sensory transducer. (541 aa)    
Predicted Functional Partners:
GAT71175.1
Chemotaxis protein CheA.
 
 0.981
GAT71176.1
Chemotaxis protein CheW.
 
 0.980
GAT69096.1
Signal transduction histidine kinase.
  
 0.971
GAT71392.1
Signal transduction histidine kinase.
 
 0.971
GAT66486.1
Sensory box histidine kinase/response regulator.
 
 0.970
GAT70016.1
Signal transduction histidine kinase.
 
 0.969
GAT70638.1
Histidine kinase.
 
 0.966
GAT67924.1
Histidine kinase.
 
 0.964
GAT66524.1
Chemotaxis protein.
  0.959
GAT71094.1
PAS domain-containing two-component system sensor histidine kinase/response regulator.
 
 0.958
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.