STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT70384.1Transcriptional regulator. (207 aa)    
Predicted Functional Partners:
GAT68256.1
marR family transcriptional regulator.
  
     0.738
GAT66719.1
marR family transcriptional regulator.
  
     0.735
GAT69777.1
marR family transcriptional regulator.
  
     0.715
GAT70131.1
Homogentisate 1,2-dioxygenase.
     0.675
GAT70383.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
    0.565
GAT69776.1
ABC transporter permease.
 
   
 0.562
GAT70382.1
Phosphoserine aminotransferase; Belongs to the UPF0311 family.
 
    0.535
GAT66849.1
araC family transcriptional regulator.
  
    0.524
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.