STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT70415.1Transcriptional regulator. (220 aa)    
Predicted Functional Partners:
GAT65626.1
Membrane protein.
 
     0.558
GAT70416.1
Membrane protein.
  
    0.537
GAT68301.1
Transcriptional regulator.
   
    0.521
GAT68562.1
arsR family transcriptional regulator.
   
    0.491
GAT65461.1
Hypothetical protein; UPF0301 transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.469
GAT66169.1
NADH-quinone oxidoreductase subunit I.
    
   0.469
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.469
GAT66278.1
Fur family transcriptional regulator; Belongs to the Fur family.
  
    0.447
GAT66742.1
Peptide ABC transporter substrate-binding protein; Belongs to the Fur family.
  
    0.447
GAT67397.1
Fur family transcriptional regulator; Belongs to the Fur family.
  
    0.447
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.