GAT70428.1 protein (Planomonospora sphaerica)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

GAT70428.1

Sulfate ABC transporter ATPase. (297 aa)

Predicted Functional Partners:

GAT70429.1

0.950

GAT70430.1

0.825

GAT69179.1

0.818

GAT70446.1

0.812

GAT70431.1

0.782

GAT68558.1

0.768

GAT66154.1

0.606

GAT66030.1

0.563

GAT67688.1

0.546

GAT65439.1

0.535

Your Current Organism:

Planomonospora sphaerica

NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAT65439.1	GAT66030.1	PS9374_01072	PS9374_01674	ABC transporter.	Multidrug ABC transporter permease.	0.429
GAT65439.1	GAT66154.1	PS9374_01072	PS9374_01798	ABC transporter.	ABC transporter.	0.427
GAT65439.1	GAT69179.1	PS9374_01072	PS9374_04850	ABC transporter.	ABC transporter.	0.499
GAT65439.1	GAT70428.1	PS9374_01072	PS9374_06110	ABC transporter.	Sulfate ABC transporter ATPase.	0.535
GAT65439.1	GAT70429.1	PS9374_01072	PS9374_06111	ABC transporter.	ABC transporter.	0.461
GAT65439.1	GAT70446.1	PS9374_01072	PS9374_06128	ABC transporter.	Multidrug ABC transporter permease.	0.470
GAT66030.1	GAT65439.1	PS9374_01674	PS9374_01072	Multidrug ABC transporter permease.	ABC transporter.	0.429
GAT66030.1	GAT66154.1	PS9374_01674	PS9374_01798	Multidrug ABC transporter permease.	ABC transporter.	0.496
GAT66030.1	GAT68558.1	PS9374_01674	PS9374_04223	Multidrug ABC transporter permease.	ABC transporter.	0.518
GAT66030.1	GAT69179.1	PS9374_01674	PS9374_04850	Multidrug ABC transporter permease.	ABC transporter.	0.443
GAT66030.1	GAT70428.1	PS9374_01674	PS9374_06110	Multidrug ABC transporter permease.	Sulfate ABC transporter ATPase.	0.563
GAT66030.1	GAT70429.1	PS9374_01674	PS9374_06111	Multidrug ABC transporter permease.	ABC transporter.	0.439
GAT66030.1	GAT70446.1	PS9374_01674	PS9374_06128	Multidrug ABC transporter permease.	Multidrug ABC transporter permease.	0.438
GAT66154.1	GAT65439.1	PS9374_01798	PS9374_01072	ABC transporter.	ABC transporter.	0.427
GAT66154.1	GAT66030.1	PS9374_01798	PS9374_01674	ABC transporter.	Multidrug ABC transporter permease.	0.496
GAT66154.1	GAT68558.1	PS9374_01798	PS9374_04223	ABC transporter.	ABC transporter.	0.560
GAT66154.1	GAT69179.1	PS9374_01798	PS9374_04850	ABC transporter.	ABC transporter.	0.438
GAT66154.1	GAT70428.1	PS9374_01798	PS9374_06110	ABC transporter.	Sulfate ABC transporter ATPase.	0.606
GAT67688.1	GAT70428.1	PS9374_03346	PS9374_06110	ABC transporter ATP-binding protein.	Sulfate ABC transporter ATPase.	0.546
GAT68558.1	GAT66030.1	PS9374_04223	PS9374_01674	ABC transporter.	Multidrug ABC transporter permease.	0.518