GAT70533.1 protein (Planomonospora sphaerica)

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

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Score

GAT70533.1

araC family transcriptional regulator. (288 aa)

Predicted Functional Partners:

rpoA

0.956

rpoB

0.931

rpoZ

0.926

rpoC

0.926

GAT65531.1

0.810

sigA

0.810

sigA-2

0.810

GAT68783.1

0.810

GAT69337.1

0.810

GAT69699.1

0.810

Your Current Organism:

Planomonospora sphaerica

NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAT65531.1	GAT70533.1	PS9374_01164	PS9374_06219	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	araC family transcriptional regulator.	0.810
GAT65531.1	rpoA	PS9374_01164	PS9374_02075	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.970
GAT65531.1	rpoB	PS9374_01164	PS9374_02038	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.968
GAT65531.1	rpoC	PS9374_01164	PS9374_02039	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.956
GAT65531.1	rpoZ	PS9374_01164	PS9374_00496	RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.939
GAT68783.1	GAT70533.1	PS9374_04448	PS9374_06219	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	araC family transcriptional regulator.	0.810
GAT68783.1	rpoA	PS9374_04448	PS9374_02075	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.976
GAT68783.1	rpoB	PS9374_04448	PS9374_02038	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.973
GAT68783.1	rpoC	PS9374_04448	PS9374_02039	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.959
GAT68783.1	rpoZ	PS9374_04448	PS9374_00496	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.939
GAT69337.1	GAT70533.1	PS9374_05012	PS9374_06219	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	araC family transcriptional regulator.	0.810
GAT69337.1	rpoA	PS9374_05012	PS9374_02075	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.974
GAT69337.1	rpoB	PS9374_05012	PS9374_02038	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.969
GAT69337.1	rpoC	PS9374_05012	PS9374_02039	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.959
GAT69337.1	rpoZ	PS9374_05012	PS9374_00496	RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.939
GAT69699.1	GAT70533.1	PS9374_05376	PS9374_06219	DNA-directed RNA polymerase sigma-70 factor.	araC family transcriptional regulator.	0.810
GAT69699.1	rpoA	PS9374_05376	PS9374_02075	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.897
GAT69699.1	rpoB	PS9374_05376	PS9374_02038	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
GAT69699.1	rpoC	PS9374_05376	PS9374_02039	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.901
GAT69699.1	rpoZ	PS9374_05376	PS9374_00496	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.895