GAT70568.1 protein (Planomonospora sphaerica)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

GAT70568.1

DNA-directed RNA polymerase sigma-70 factor. (103 aa)

Predicted Functional Partners:

GAT70569.1

0.773

GAT67365.1

0.673

GAT70835.1

0.658

GAT70202.1

0.656

GAT71181.1

0.645

GAT68223.1

0.607

GAT67382.1

0.523

GAT65077.1

0.517

rpoC

0.514

GAT65080.1

0.510

Your Current Organism:

Planomonospora sphaerica

NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAT65077.1	GAT65080.1	PS9374_00709	PS9374_00712	ATPase involved in chromosome partitioning.	Type II secretion system protein.	0.925
GAT65077.1	GAT70568.1	PS9374_00709	PS9374_06254	ATPase involved in chromosome partitioning.	DNA-directed RNA polymerase sigma-70 factor.	0.517
GAT65080.1	GAT65077.1	PS9374_00712	PS9374_00709	Type II secretion system protein.	ATPase involved in chromosome partitioning.	0.925
GAT65080.1	GAT70568.1	PS9374_00712	PS9374_06254	Type II secretion system protein.	DNA-directed RNA polymerase sigma-70 factor.	0.510
GAT67365.1	GAT70568.1	PS9374_03018	PS9374_06254	Saccharopine dehydrogenase.	DNA-directed RNA polymerase sigma-70 factor.	0.673
GAT67382.1	GAT70568.1	PS9374_03035	PS9374_06254	Membrane protein.	DNA-directed RNA polymerase sigma-70 factor.	0.523
GAT68223.1	GAT70568.1	PS9374_03884	PS9374_06254	Hypothetical protein.	DNA-directed RNA polymerase sigma-70 factor.	0.607
GAT70202.1	GAT70568.1	PS9374_05882	PS9374_06254	Anti-sigma regulatory factor.	DNA-directed RNA polymerase sigma-70 factor.	0.656
GAT70568.1	GAT65077.1	PS9374_06254	PS9374_00709	DNA-directed RNA polymerase sigma-70 factor.	ATPase involved in chromosome partitioning.	0.517
GAT70568.1	GAT65080.1	PS9374_06254	PS9374_00712	DNA-directed RNA polymerase sigma-70 factor.	Type II secretion system protein.	0.510
GAT70568.1	GAT67365.1	PS9374_06254	PS9374_03018	DNA-directed RNA polymerase sigma-70 factor.	Saccharopine dehydrogenase.	0.673
GAT70568.1	GAT67382.1	PS9374_06254	PS9374_03035	DNA-directed RNA polymerase sigma-70 factor.	Membrane protein.	0.523
GAT70568.1	GAT68223.1	PS9374_06254	PS9374_03884	DNA-directed RNA polymerase sigma-70 factor.	Hypothetical protein.	0.607
GAT70568.1	GAT70202.1	PS9374_06254	PS9374_05882	DNA-directed RNA polymerase sigma-70 factor.	Anti-sigma regulatory factor.	0.656
GAT70568.1	GAT70569.1	PS9374_06254	PS9374_06255	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase sigma-70 factor.	0.773
GAT70568.1	GAT70835.1	PS9374_06254	PS9374_06523	DNA-directed RNA polymerase sigma-70 factor.	RNA polymerase sigma (70) factor.	0.658
GAT70568.1	GAT71181.1	PS9374_06254	PS9374_06872	DNA-directed RNA polymerase sigma-70 factor.	Anti-sigma regulatory factor.	0.645
GAT70568.1	rpoC	PS9374_06254	PS9374_02039	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.514
GAT70569.1	GAT70568.1	PS9374_06255	PS9374_06254	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase sigma-70 factor.	0.773
GAT70569.1	rpoC	PS9374_06255	PS9374_02039	DNA-directed RNA polymerase sigma-70 factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.514