STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT70626.1ATPase AAA. (669 aa)    
Predicted Functional Partners:
GAT70627.1
USG protein.
 
     0.947
GAT70629.1
Cytochrome C.
 
     0.824
GAT70635.1
SIR2 family protein.
  
     0.771
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.738
GAT64493.1
ATP-binding protein.
  
     0.726
GAT69346.1
Multi-sensor hybrid histidine kinase.
 
  
  0.692
GAT69614.1
Hypothetical protein.
 
     0.691
GAT70633.1
Cytochrome C.
  
     0.683
GAT70630.1
HEXXH motif domain-containing protein.
 
     0.674
GAT69478.1
Multi-sensor hybrid histidine kinase.
 
  
  0.651
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.