STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT70786.1Pterin-4-alpha-carbinolamine dehydratase. (97 aa)    
Predicted Functional Partners:
GAT67746.1
Phenylalanine 4-monooxygenase.
 
 0.985
GAT67947.1
4a-hydroxytetrahydrobiopterin dehydratase.
    
  0.778
GAT70131.1
Homogentisate 1,2-dioxygenase.
  
  
 0.583
GAT69600.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.558
GAT70785.1
Fuculose phosphate aldolase.
  
    0.527
GAT70784.1
LPS kinase.
       0.526
GAT70787.1
Superoxide dismutase.
       0.450
GAT65867.1
Exopolyphosphatase.
  
  
 0.406
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.