STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT71007.1Isoprenylcysteine carboxyl methyltransferase. (213 aa)    
Predicted Functional Partners:
GAT68653.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.756
GAT66265.1
Thiosulfate sulfurtransferase.
    
  0.624
GAT68273.1
Thiosulfate sulfurtransferase.
    
  0.624
mmuM
Homocysteine methyltransferase.
    
  0.622
GAT67093.1
Fatty acid hydroxylase.
 
  
  0.543
GAT71006.1
Metal ABC transporter ATPase.
       0.524
GAT71008.1
Hypothetical protein.
       0.510
GAT71009.1
Copper resistance protein.
 
     0.486
GAT68407.1
Peptidase M48.
  
 
 0.477
GAT69767.1
NUDIX hydrolase.
    
 0.451
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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