STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT71200.1Integrase; Belongs to the 'phage' integrase family. (367 aa)    
Predicted Functional Partners:
GAT65184.1
Phosphoribosyltransferase.
   
    0.812
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.807
GAT68933.1
Integrase.
 
     0.758
GAT69360.1
Integrase.
 
     0.741
GAT70936.1
DNA-binding protein.
  
     0.696
GAT67239.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
 
     0.689
GAT64714.1
Prephenate dehydrogenase.
  
    0.666
GAT67734.1
DUF159 domain-containing protein; Belongs to the SOS response-associated peptidase family.
   
    0.659
whiA
Sporulation protein; Involved in cell division and chromosome segregation.
   
    0.659
GAT66272.1
ATPase.
  
     0.620
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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